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f2rl1.S coagulation factor 2 (thrombin) receptor-like 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496339, updated on 17-Aug-2024

Summary

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Official Symbol
f2rl1.S
Official Full Name
coagulation factor 2 (thrombin) receptor-like 1 S homeolog
Primary source
Xenbase:XB-GENE-17343163
Locus tag
XELAEV_18010901mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
par2
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 1S
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (173099469..173108246)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (157108271..157117067)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing GTPase activating protein 2 S homeolog Neighboring gene coagulation factor II (thrombin) receptor-like 2 S homeolog Neighboring gene coagulation factor 2 (thrombin) receptor S homeolog Neighboring gene proteinase-activated receptor 2 Neighboring gene S100 calcium binding protein Z S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables thrombin-activated receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within blood coagulation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within thrombin-activated receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
coagulation factor 2 (thrombin) receptor-like 1 S homeolog
Names
coagulation factor II receptor-like 1
protease-activated receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095490.1 → NP_001088959.1  coagulation factor 2 (thrombin) receptor-like 1 S homeolog precursor

    See identical proteins and their annotated locations for NP_001088959.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088935
    UniProtKB/TrEMBL
    Q5HZP6, Q5U791
    Conserved Domains (2) summary
    pfam00001
    Location:83 → 334
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:144 → 351
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    173099469..173108246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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