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reep3.S receptor accessory protein 3 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496337, updated on 4-Nov-2024

Summary

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Official Symbol
reep3.S
Official Full Name
receptor accessory protein 3 S homeolog
Primary source
Xenbase:XB-GENE-17346898
Locus tag
XELAEV_18036814mg
See related
EnsemblRapid:ENSXLAG00005018570 AllianceGenome:Xenbase:XB-GENE-17346898
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
reep3-b
Summary
Predicted to enable microtubule binding activity. Predicted to act upstream of or within mitotic nuclear membrane reassembly. Predicted to be located in cytoplasmic microtubule and endoplasmic reticulum membrane. Orthologous to human REEP3 (receptor accessory protein 3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See reep3.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (9825249..9923830)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (9802393..9901364)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor binding factor 2 S homeolog Neighboring gene jumonji domain containing 1C S homeolog Neighboring gene glycine-rich cell wall structural protein 1.8-like Neighboring gene glycine-rich cell wall structural protein 1.8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within mitotic nuclear membrane reassembly ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within nuclear envelope organization ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in cytoplasmic microtubule IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
receptor expression-enhancing protein 3-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    9825249..9923830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041570865.1 → XP_041426799.1  receptor expression-enhancing protein 3-B

    UniProtKB/Swiss-Prot
    Q5HZP8
    UniProtKB/TrEMBL
    A0A1L8FE65, A0A974H9L5
    Related
    ENSXLAP00005054896.1, ENSXLAT00005056084.1
    Conserved Domains (1) summary
    pfam03134
    Location:19 → 95
    TB2_DP1_HVA22; TB2/DP1, HVA22 family

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001095488.1: Suppressed sequence

    Description
    NM_001095488.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5HZP8.1 GenPept UniProtKB/Swiss-Prot:Q5HZP8

Gene LinkOut

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Molecular Biology Databases
Research Materials