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slc30a8.L solute carrier family 30 (zinc transporter), member 8 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496294, updated on 18-Sep-2024

Summary

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Official Symbol
slc30a8.L
Official Full Name
solute carrier family 30 (zinc transporter), member 8 L homeolog
Primary source
Xenbase:XB-GENE-958130
Locus tag
XELAEV_18032308mg
See related
EnsemblRapid:ENSXLAG00005006427
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
znt8; slc30a3; slc30a8
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Genomic context

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See slc30a8.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (147693375..147722468)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (138551041..138580246)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene UTP23, small subunit processome component L homeolog Neighboring gene RAD21 cohesin complex component L homeolog Neighboring gene mediator complex subunit 30 L homeolog Neighboring gene exostosin glycosyltransferase 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc:proton antiporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within insulin secretion IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within monoatomic cation transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to glucose IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to zinc ion IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within zinc ion import into organelle ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within zinc ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within zinc ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in secretory granule membrane ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in transport vesicle membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
proton-coupled zinc antiporter SLC30A8; zinc transporter 8
Names
solute carrier family 30 (zinc transporter), member 3
solute carrier family 30 member 8
znT-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    147693375..147722468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018266658.2 → XP_018122147.1  zinc transporter 8 isoform X2

    UniProtKB/TrEMBL
    A0A8J0VHT0, A0A974CPY2
    Related
    ENSXLAP00005019096.1, ENSXLAT00005019430.1

  2. XM_041566616.1 → XP_041422550.1  zinc transporter 8 isoform X1

    UniProtKB/Swiss-Prot
    Q5I020
    UniProtKB/TrEMBL
    A0A8J1KZ20, A0A974CPY2
    Related
    ENSXLAP00005019114.1, ENSXLAT00005019449.1
    Conserved Domains (1) summary
    TIGR01297
    Location:78 → 360
    CDF; cation diffusion facilitator family transporter

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001095453.1: Suppressed sequence

    Description
    NM_001095453.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5I020.1 GenPept UniProtKB/Swiss-Prot:Q5I020

Gene LinkOut

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