U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

btbd9.L BTB (POZ) domain containing 9 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496252, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
btbd9.L
Official Full Name
BTB (POZ) domain containing 9 L homeolog
Primary source
Xenbase:XB-GENE-947508
Locus tag
XELAEV_18026365mg
See related
EnsemblRapid:ENSXLAG00005031085
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
btbd9
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5L
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (22996489..23074853, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (22294979..22369545, complement)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121393581 Neighboring gene uncharacterized LOC121393517 Neighboring gene glyoxalase 1 L homeolog Neighboring gene uncharacterized LOC121393582 Neighboring gene uncharacterized LOC121393609

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
BTB (POZ) domain containing 9 L homeolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095433.1 → NP_001088902.1  BTB (POZ) domain containing 9 L homeolog

    See identical proteins and their annotated locations for NP_001088902.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088726
    UniProtKB/TrEMBL
    A0A974CUC8, Q5M7B5
    Related
    ENSXLAP00005093075.1, ENSXLAT00005094758.1
    Conserved Domains (4) summary
    smart00225
    Location:38 → 138
    BTB; Broad-Complex, Tramtrack and Bric a brac
    cd14822
    Location:138 → 196
    BACK_BTBD9_like; BACK-like Domain C-terminal to BTB in BTB/POZ domain-containing protein 9 and similar proteins
    pfam00651
    Location:32 → 135
    BTB; BTB/POZ domain
    pfam00754
    Location:323 → 405
    F5_F8_type_C; F5/8 type C domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    22996489..23074853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018262064.2 → XP_018117553.1  BTB (POZ) domain containing 9 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8G6N4, A0A974CUC8, A0A974CVH2
    Related
    ENSXLAP00005093321.1, ENSXLAT00005095004.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.