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tc2n.S tandem C2 domains, nuclear S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496221, updated on 17-Aug-2024

Summary

Official Symbol
tc2n.S
Official Full Name
tandem C2 domains, nuclear S homeolog
Primary source
Xenbase:XB-GENE-983034
Locus tag
XELAEV_18041319mg
See related
EnsemblRapid:ENSXLAG00005008919
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tc2n
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Genomic context

See tc2n.S in Genome Data Viewer
Location:
chromosome: 8S
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8S NC_054386.1 (21181447..21216795)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8S NC_030739.1 (21097581..21133174)

Chromosome 8S - NC_054386.1Genomic Context describing neighboring genes Neighboring gene ataxin 3 S homeolog Neighboring gene fibulin 5 S homeolog Neighboring gene protein phosphatase 4 regulatory subunit 3A S homeolog Neighboring gene coiled-coil domain containing 88C S homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
tandem C2 domains, nuclear S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095408.1NP_001088877.1  tandem C2 domains, nuclear S homeolog

    See identical proteins and their annotated locations for NP_001088877.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088683
    UniProtKB/TrEMBL
    A0A974C1W7, Q5M7E7
    Related
    ENSXLAP00005025908.1, ENSXLAT00005026626.1
    Conserved Domains (2) summary
    cd08684
    Location:234336
    C2A_Tac2-N; C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus)
    cd08692
    Location:347481
    C2B_Tac2-N; C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054386.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    21181447..21216795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)