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spef2.L sperm flagellar 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496211, updated on 17-Aug-2024

Summary

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Official Symbol
spef2.L
Official Full Name
sperm flagellar 2 L homeolog
Primary source
Xenbase:XB-GENE-5821398
Locus tag
XELAEV_18008369mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
spef2
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Genomic context

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Location:
chromosome: 1L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (215905250..215940423, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (202718589..202753921, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene calcyphosine like L homeolog Neighboring gene interleukin 7 receptor L homeolog Neighboring gene uncharacterized LOC121395634 Neighboring gene prolactin receptor L homeolog Neighboring gene alanine--glyoxylate aminotransferase 2 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
sperm flagellar 2 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095399.1 → NP_001088868.1  sperm flagellar 2 L homeolog

    See identical proteins and their annotated locations for NP_001088868.1

    Status: PROVISIONAL

    Source sequence(s)
    BC088673
    UniProtKB/TrEMBL
    Q5M7F7
    Conserved Domains (1) summary
    pfam06294
    Location:6 → 97
    CH_2; CH-like domain in sperm protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    215905250..215940423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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