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etfa.L electron transfer flavoprotein subunit alpha L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496165, updated on 18-Sep-2024

Summary

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Official Symbol
etfa.L
Official Full Name
electron transfer flavoprotein subunit alpha L homeolog
Primary source
Xenbase:XB-GENE-943227
Locus tag
XELAEV_18017970mg
See related
EnsemblRapid:ENSXLAG00005035993
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ema; ga2; etfa; madd
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Genomic context

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See etfa.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (95911380..95935965, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (80595906..80620599, complement)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene neuregulin 4 L homeolog Neighboring gene transmembrane protein 266 L homeolog Neighboring gene ISL LIM homeobox 2 L homeolog Neighboring gene S-phase cyclin A-associated protein in the ER L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC130656

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
  
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
electron transfer flavoprotein subunit alpha L homeolog
Names
electron transfer flavoprotein alpha subunit L homeolog
electron-transfer-flavoprotein, alpha polypeptide

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095385.1 → NP_001088854.1  electron transfer flavoprotein subunit alpha L homeolog

    See identical proteins and their annotated locations for NP_001088854.1

    Status: PROVISIONAL

    Source sequence(s)
    BC106228
    UniProtKB/TrEMBL
    A0A974DDD5, Q3KQG0, Q5M989
    Related
    ENSXLAP00005107634.1, ENSXLAT00005109767.1
    Conserved Domains (3) summary
    PLN00022
    Location:6 → 333
    PLN00022; electron transfer flavoprotein subunit alpha; Provisional
    cd01715
    Location:21 → 188
    ETF_alpha; The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an ...
    pfam00766
    Location:211 → 293
    ETF_alpha; Electron transfer flavoprotein FAD-binding domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    95911380..95935965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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