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ORF46 ORF46 [ Human gammaherpesvirus 8 ]

Gene ID: 4961472, updated on 18-Aug-2023

Summary

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Gene symbol
ORF46
Gene description
ORF46
Locus tag
HHV8GK18_gp50
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Human gammaherpesvirus 8 (strain: GK18, type: P, common: Kaposi's sarcoma-associated herpesvirus, acronym: HHV-8, acronym: KSHV, nat-host: Homo sapiens)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Rhadinovirus
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Genomic context

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Sequence:
NC_009333.1 (67444..69503, complement)

NC_009333.1Genomic Context describing neighboring genes Neighboring gene ORF40 Neighboring gene ORF42 Neighboring gene ORF43 Neighboring gene ORF44 Neighboring gene ORF45 Neighboring gene ORF47 Neighboring gene ORF48 Neighboring gene ORF50 Neighboring gene ORF49 Neighboring gene K8 Neighboring gene K8.1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009333.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Positive and negative regulation in the promoter of the ORF46 gene of Kaposi's sarcoma-associated herpesvirus. Wang SS, et al. Virus Res, 2012 May. PMID 22366521
  2. Kaposi's sarcoma-associated herpesvirus immune modulation: an overview. Rezaee SAR, et al. J Gen Virol, 2006 Jul. PMID 16760382
  3. Global mapping of herpesvirus-host protein complexes reveals a transcription strategy for late genes. Davis ZH, et al. Mol Cell, 2015 Jan 22. PMID 25544563, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General protein information

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Preferred Names
ORF46
YP_001129398.1
  • herpesvirus core gene UL2 family

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009333.1 Reference assembly

    Range
    67444..69503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001129398.1 ORF46 [Human gammaherpesvirus 8]

    See identical proteins and their annotated locations for YP_001129398.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    F5HFA1
    UniProtKB/TrEMBL
    A0A0N9SDW0, A0A7D3QKZ5, P88934, Q2HR87, Q76RG8
    Conserved Domains (2) summary
    cd10027
    Location:86 → 90
    UDG-F1-like; motif A [structural motif]
    cl00483
    Location:1 → 253
    UDG-like; uracil-DNA glycosylases (UDG) and related enzymes
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
6LYV_A.1
6LYV_C.1
6LYV_E.1
6LYV_G.1
6LYV_I.1
6LYV_K.1
6LYV_M.1
6LYV_O.1

Gene LinkOut

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