pnpla4.L patatin like phospholipase domain containing 4 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: pnpla4.L
Official Full Name: patatin like phospholipase domain containing 4 L homeolog
Primary source: Xenbase:XB-GENE-968683
Locus tag: XELAEV_18011739mg
See related: EnsemblRapid:ENSXLAG00005027250
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: pnpla4
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Genomic context

Location:: chromosome: 2L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (36694250..36706233)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (35625890..35637761)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables catalytic activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables retinyl-palmitate esterase activity	IEA Inferred from Electronic Annotation more info
enables triglyceride lipase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within lipid catabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: patatin like phospholipase domain containing 4 L homeolog

Names: patatin-like phospholipase domain containing 4

NP_001088835.1

EC 3.1.1.3

XP_018100771.1

EC 3.1.1.3

XP_018100772.1

EC 3.1.1.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001095366.2 → NP_001088835.1 patatin like phospholipase domain containing 4 L homeolog

See identical proteins and their annotated locations for NP_001088835.1

Status: PROVISIONAL

Source sequence(s)

BC087330

UniProtKB/TrEMBL

A0A974DLE7, A0A974DMG5, Q5M9B2

Related

ENSXLAP00005080986.1, ENSXLAT00005082597.1

Conserved Domains (1) summary

cd07222
Location:5 → 250

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

36694250..36706233

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_018245283.2 → XP_018100772.1 patatin like phospholipase domain containing 4 L homeolog isoform X2

UniProtKB/TrEMBL

A0A8J0UF45
XM_018245282.2 → XP_018100771.1 patatin like phospholipase domain containing 4 L homeolog isoform X1

UniProtKB/TrEMBL

A0A974DLE7, A0A974DMG5, Q5M9B2