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mpdu1.S mannose-P-dolichol utilization defect 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496082, updated on 4-Nov-2024

Summary

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Official Symbol
mpdu1.S
Official Full Name
mannose-P-dolichol utilization defect 1 S homeolog
Primary source
Xenbase:XB-GENE-6252813
Locus tag
XELAEV_18001057mg
See related
EnsemblRapid:ENSXLAG00005010521 AllianceGenome:Xenbase:XB-GENE-6252813
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cdgif; lec35; mpdu1; my008; pqlc5; pp3958; hbebp2bpa
Summary
Predicted to act upstream of or within oligosaccharide biosynthetic process. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mpdu1.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (131187686..131192812, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694811.1 (7484377..7489863, complement)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene EPH receptor B4 S homeolog Neighboring gene C-type natriuretic peptide-like Neighboring gene small nucleolar RNA SNORD10 Neighboring gene eukaryotic translation initiation factor 4A1 S homeolog Neighboring gene SUMO specific peptidase 3 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
mannose-P-dolichol utilization defect 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    131187686..131192812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018239780.2 → XP_018095269.1  mannose-P-dolichol utilization defect 1 protein

    UniProtKB/TrEMBL
    Q32NW9, Q5PPT9
    Related
    ENSXLAP00005031017.1, ENSXLAT00005031782.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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