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fdx1l.2.L ferredoxin 1 like gene 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496078, updated on 17-Aug-2024

Summary

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Official Symbol
fdx1l.2.L
Official Full Name
ferredoxin 1 like gene 2 L homeolog
Primary source
Xenbase:XB-GENE-5934231
Locus tag
XELAEV_18002901mg
See related
EnsemblRapid:ENSXLAG00005025223
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
fdx1b; fdx1b.L; XB5934217.L; adrenodoxin; LOC100498263.L
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Genomic context

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See fdx1l.2.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (29355101..29362590, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694828.1 (1908281..1915770)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108704538 Neighboring gene uncharacterized LOC121396959 Neighboring gene rho GTPase activating protein 20B L homeolog Neighboring gene moesin L homeolog Neighboring gene uncharacterized LOC108704536

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within P450-containing electron transport chain IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Adrenodoxin, mitochondrial-like
Names
adrenodoxin-like L homeolog
ferredoxin 1b L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095341.1 → NP_001088810.1  Adrenodoxin, mitochondrial-like

    See identical proteins and their annotated locations for NP_001088810.1

    Status: PROVISIONAL

    Source sequence(s)
    BC087494
    UniProtKB/TrEMBL
    Q5PPU4
    Related
    ENSXLAP00005074876.1, ENSXLAT00005076456.1
    Conserved Domains (1) summary
    cl00159
    Location:59 → 160
    fer2; 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    29355101..29362590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
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