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fancd2os.L FANCD2 opposite strand L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496042, updated on 4-Nov-2024

Summary

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Official Symbol
fancd2os.L
Official Full Name
FANCD2 opposite strand L homeolog
Primary source
Xenbase:XB-GENE-965510
Locus tag
XELAEV_18023769mg
See related
EnsemblRapid:ENSXLAG00005032603 AllianceGenome:Xenbase:XB-GENE-965510
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
c3orf24; fancd2os; fancd2os.S
Summary
Orthologous to human FANCD2OS (FANCD2 opposite strand). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See fancd2os.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (123233750..123234778, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (117962424..117963452, complement)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene ATPase plasma membrane Ca2+ transporting 2 L homeolog Neighboring gene FA complementation group D2 L homeolog Neighboring gene ER membrane protein complex subunit 3 L homeolog Neighboring gene uncharacterized LOC121403160

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC496042
Names
FANCD2 opposite strand S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095309.1 → NP_001088778.1  uncharacterized protein LOC496042

    See identical proteins and their annotated locations for NP_001088778.1

    Status: PREDICTED

    Source sequence(s)
    BC087437
    UniProtKB/TrEMBL
    A0A974D6M8, Q5PPY7
    Related
    ENSXLAP00005097657.1, ENSXLAT00005099456.1
    Conserved Domains (1) summary
    pfam15124
    Location:4 → 173
    DUF4563; Domain of unknown function (DUF4563)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    123233750..123234778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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