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nudt17.L nudix hydrolase 17 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 496025, updated on 17-Aug-2024

Summary

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Official Symbol
nudt17.L
Official Full Name
nudix hydrolase 17 L homeolog
Primary source
Xenbase:XB-GENE-979162
Locus tag
XELAEV_18040768mg
See related
EnsemblRapid:ENSXLAG00005035732
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
nudt17
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Genomic context

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Location:
chromosome: 8L
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (131529822..131537640)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (116268107..116276923)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha 10 L homeolog Neighboring gene ring finger protein 115 L homeolog Neighboring gene protein inhibitor of activated STAT 3 L homeolog Neighboring gene ankyrin repeat domain 35 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nucleoside diphosphate-linked moiety X motif 17
Names
Nudix motif 17
nudix (nucleoside diphosphate linked moiety X)-type motif 17
NP_001088761.1
XP_018084626.1
XP_018084627.1
XP_018084628.1
XP_041428051.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095292.1 → NP_001088761.1  nucleoside diphosphate-linked moiety X motif 17

    See identical proteins and their annotated locations for NP_001088761.1

    Status: PROVISIONAL

    Source sequence(s)
    BC087418
    UniProtKB/Swiss-Prot
    Q5PQ04
    Related
    ENSXLAP00005106869.1, ENSXLAT00005108981.1
    Conserved Domains (1) summary
    cd04694
    Location:94 → 234
    Nudix_Hydrolase_35; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    131529822..131537640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018229137.2 → XP_018084626.1  nucleoside diphosphate-linked moiety X motif 17 isoform X1

    UniProtKB/TrEMBL
    A0A1L8FD10, A0A974CAD0
    Related
    ENSXLAP00005106857.1, ENSXLAT00005108969.1
    Conserved Domains (1) summary
    cd04694
    Location:94 → 234
    Nudix_Hydrolase_35; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...

  2. XM_018229139.2 → XP_018084628.1  nucleoside diphosphate-linked moiety X motif 17 isoform X1

    UniProtKB/TrEMBL
    A0A1L8FD10, A0A974CAD0
    Related
    ENSXLAP00005106835.1, ENSXLAT00005108947.1
    Conserved Domains (1) summary
    cd04694
    Location:94 → 234
    Nudix_Hydrolase_35; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...

  3. XM_041572117.1 → XP_041428051.1  nucleoside diphosphate-linked moiety X motif 17 isoform X1

    UniProtKB/TrEMBL
    A0A1L8FD10, A0A974CAD0
    Related
    ENSXLAP00005106806.1, ENSXLAT00005108919.1
    Conserved Domains (1) summary
    cd04694
    Location:94 → 234
    Nudix_Hydrolase_35; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...

  4. XM_018229138.2 → XP_018084627.1  nucleoside diphosphate-linked moiety X motif 17 isoform X1

    UniProtKB/TrEMBL
    A0A1L8FD10, A0A974CAD0
    Related
    ENSXLAP00005106863.1, ENSXLAT00005108975.1
    Conserved Domains (1) summary
    cd04694
    Location:94 → 234
    Nudix_Hydrolase_35; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5PQ04.1 GenPept UniProtKB/Swiss-Prot:Q5PQ04

Gene LinkOut

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