cebpz.L CCAAT enhancer binding protein zeta L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cebpz.L
Official Full Name: CCAAT enhancer binding protein zeta L homeolog
Primary source: Xenbase:XB-GENE-866524
Locus tag: XELAEV_180268731mg
See related: EnsemblRapid:ENSXLAG00005032029 AllianceGenome:Xenbase:XB-GENE-866524
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cebpz
Summary: Predicted to be located in nucleus. Orthologous to human CEBPZ (CCAAT enhancer binding protein zeta). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 5L

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (58003918..58035358, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (56698664..56732595, complement)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: CCAAT enhancer binding protein zeta L homeolog

Names: CCAAT/enhancer binding protein (C/EBP), zeta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001095110.1 → NP_001088579.2 CCAAT enhancer binding protein zeta L homeolog

Status: PROVISIONAL

Source sequence(s)

BC084984

UniProtKB/TrEMBL

A0A8J0Q2C0, Q5U4R2

Related

ENSXLAP00005096190.1, ENSXLAT00005097957.1

Conserved Domains (2) summary

COG5593
Location:192 → 867

COG5593; Nucleic-acid-binding protein possibly involved in ribosomal biogenesis [Translation, ribosomal structure and biogenesis]

pfam03914
Location:537 → 735

CBF; CBF/Mak21 family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

58003918..58035358 complement

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GenBank, FASTA, Sequence Viewer (Graphics)