U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC495455 uncharacterized LOC495455 [ Xenopus laevis (African clawed frog) ]

Gene ID: 495455, updated on 18-Aug-2023

Summary

Go to the top of the page Help
Gene symbol
LOC495455
Gene description
uncharacterized LOC495455
Locus tag
XELAEV_18024349mg
See related
EnsemblRapid:ENSXLAG00005006055
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC495455 in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (7252694..7257111, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (7082410..7086827, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene plakophilin 3 S homeolog Neighboring gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain S homeolog Neighboring gene CD81 protein S homeolog Neighboring gene tyrosine hydroxylase S homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC495455

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095108.1 → NP_001088577.1  uncharacterized protein LOC495455

    See identical proteins and their annotated locations for NP_001088577.1

    Status: PREDICTED

    Source sequence(s)
    BC084982
    UniProtKB/TrEMBL
    A0A974HKU2, Q5U4R4
    Related
    ENSXLAP00005018105.1, ENSXLAT00005018401.1
    Conserved Domains (1) summary
    pfam15264
    Location:81 → 210
    TSSC4; Tumour suppressing sub-chromosomal transferable candidate 4

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    7252694..7257111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials