cenpn.L centromere protein N L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cenpn.L
Official Full Name: centromere protein N L homeolog
Primary source: Xenbase:XB-GENE-6253842
Locus tag: XELAEV_18022567mg
See related: EnsemblRapid:ENSXLAG00005018178 AllianceGenome:Xenbase:XB-GENE-6253842
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cenpn; cenp-n; cenpn-a; cenpn-b
Summary: Predicted to act upstream of or within CENP-A containing chromatin assembly and chromosome segregation. Predicted to be located in chromosome, centromeric region and nucleoplasm. Orthologous to human CENPN (centromere protein N). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 4L

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4L	NC_054377.1 (45250931..45261104, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4L	NC_030730.1 (42766062..42776231, complement)

Chromosome 4L - NC_054377.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within CENP-A containing chromatin assembly	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within chromosome segregation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in chromosome	IEA Inferred from Electronic Annotation more info
located_in chromosome, centromeric region	IEA Inferred from Electronic Annotation more info
located_in nucleoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: centromere protein N-B

Names: CENP-N-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001095089.1 → NP_001088558.1 centromere protein N-B

See identical proteins and their annotated locations for NP_001088558.1

Status: PROVISIONAL

Source sequence(s)

BC084956

UniProtKB/Swiss-Prot

Q5U4T8

Related

ENSXLAP00005053628.1, ENSXLAT00005054801.1

Conserved Domains (1) summary

pfam05238
Location:21 → 353

CENP-N; Kinetochore protein CHL4 like

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

45250931..45261104 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)