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mlf2.S myeloid leukemia factor 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495425, updated on 4-Nov-2024

Summary

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Official Symbol
mlf2.S
Official Full Name
myeloid leukemia factor 2 S homeolog
Primary source
Xenbase:XB-GENE-17337948
Locus tag
XELAEV_18036719mg
See related
EnsemblRapid:ENSXLAG00005022981 AllianceGenome:Xenbase:XB-GENE-17337948
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be located in cytoplasm and nucleus. Orthologous to human MLF2 (myeloid leukemia factor 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mlf2.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (4755151..4770259)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (4773419..4788751)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene cd4 receptor S homeolog Neighboring gene lymphocyte activating 3 S homeolog Neighboring gene PILR alpha-associated neural protein Neighboring gene novel protein containing four WD domain, G-beta repeats S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC495425

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095082.1 → NP_001088551.1  uncharacterized protein LOC495425

    See identical proteins and their annotated locations for NP_001088551.1

    Status: PREDICTED

    Source sequence(s)
    BC084940
    UniProtKB/TrEMBL
    Q5U4V4
    Conserved Domains (1) summary
    pfam10248
    Location:3 → 88
    Mlf1IP; Myelodysplasia-myeloid leukemia factor 1-interacting protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    4755151..4770259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018227000.2 → XP_018082489.1  uncharacterized protein LOC495425 isoform X3

    UniProtKB/TrEMBL
    A0A8J0TDU6, A0A974CAR5
    Related
    ENSXLAP00005067760.1, ENSXLAT00005069292.1

  2. XM_018226998.2 → XP_018082487.1  uncharacterized protein LOC495425 isoform X1

    UniProtKB/TrEMBL
    A0A8J0T501, A0A974CAR5

  3. XM_018226999.2 → XP_018082488.1  uncharacterized protein LOC495425 isoform X2

    UniProtKB/TrEMBL
    A0A8J0TD49, A0A974CAR5
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials