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ube2j2.L ubiquitin conjugating enzyme E2 J2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495424, updated on 17-Aug-2024

Summary

Official Symbol
ube2j2.L
Official Full Name
ubiquitin conjugating enzyme E2 J2 L homeolog
Primary source
Xenbase:XB-GENE-956516
Locus tag
XELAEV_18035662mg
See related
EnsemblRapid:ENSXLAG00005016045
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ube2j2
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Genomic context

See ube2j2.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (97200907..97223010)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (87420620..87442334)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene phospholipase A2 homolog otoconin-22-like Neighboring gene sodium channel, non voltage gated 1 delta subunit L homeolog Neighboring gene C1q and TNF related 12 Neighboring gene Beta-1,3-galactosyltransferase 6 L homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
ubiquitin conjugating enzyme E2 J2 L homeolog
Names
ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog)
NP_001088550.1
XP_018080084.1
XP_018080085.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095081.1NP_001088550.1  ubiquitin conjugating enzyme E2 J2 L homeolog

    See identical proteins and their annotated locations for NP_001088550.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084937
    UniProtKB/TrEMBL
    A0A974HCC9, Q5U4V7
    Related
    ENSXLAP00005047270.1, ENSXLAT00005048373.1
    Conserved Domains (1) summary
    cd00195
    Location:14127
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    97200907..97223010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018224596.2XP_018080085.1  ubiquitin conjugating enzyme E2 J2 L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A974HCC9, Q5U4V7
  2. XM_018224595.2XP_018080084.1  ubiquitin conjugating enzyme E2 J2 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0SZK6
    Related
    ENSXLAP00005047264.1, ENSXLAT00005048368.1