U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

c5h6orf120.L chromosome 5 C6orf120 homolog L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495371, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
c5h6orf120.L
Official Full Name
chromosome 5 C6orf120 homolog L homeolog
Primary source
Xenbase:XB-GENE-6253959
Locus tag
XELAEV_18026775mg
See related
EnsemblRapid:ENSXLAG00005025329 AllianceGenome:Xenbase:XB-GENE-6253959
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
c6orf120; c6orf120.L
Summary
Predicted to be located in extracellular region. Orthologous to human C6orf120 (chromosome 6 open reading frame 120). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See c5h6orf120.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (51786152..51790022, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (50598560..50602424, complement)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene TATA-box binding protein L homeolog Neighboring gene uncharacterized LOC121393664 Neighboring gene PHD finger protein 10 L homeolog Neighboring gene WD repeat domain 27 L homeolog Neighboring gene uncharacterized LOC121393666

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC495371

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001171714.1 → NP_001165185.1  uncharacterized protein LOC495371 precursor

    Status: PREDICTED

    Source sequence(s)
    BC084835, BX842964
    UniProtKB/TrEMBL
    A0A8J0QFT0, A0A974CUB9
    Related
    ENSXLAP00005075255.1, ENSXLAT00005076836.1
    Conserved Domains (1) summary
    pfam17065
    Location:1 → 187
    UPF0669; Putative cytokine, C6ORF120

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    51786152..51790022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.