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eef1e1.L eukaryotic translation elongation factor 1 epsilon 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495305, updated on 4-Nov-2024

Summary

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Official Symbol
eef1e1.L
Official Full Name
eukaryotic translation elongation factor 1 epsilon 1 L homeolog
Primary source
Xenbase:XB-GENE-6077689
Locus tag
XELAEV_18031629mg
See related
EnsemblRapid:ENSXLAG00005016881 AllianceGenome:Xenbase:XB-GENE-6077689
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
eef1e1
Summary
Predicted to enable translation elongation factor activity. Predicted to act upstream of or within positive regulation of DNA damage response, signal transduction by p53 class mediator and translational elongation. Predicted to be located in cytoplasm and nucleus. Predicted to be part of aminoacyl-tRNA synthetase multienzyme complex. Orthologous to human EEF1E1 (eukaryotic translation elongation factor 1 epsilon 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See eef1e1.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (94558167..94564633, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (87804899..87811365, complement)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene thioredoxin domain containing 5 L homeolog Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 5 L homeolog Neighboring gene solute carrier family 35 member B3 S homolog Neighboring gene uncharacterized LOC121394690

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of DNA damage response, signal transduction by p53 class mediator IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within translational elongation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
eukaryotic translation elongation factor 1 epsilon 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094972.1 → NP_001088441.1  eukaryotic translation elongation factor 1 epsilon 1 L homeolog

    See identical proteins and their annotated locations for NP_001088441.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084764
    UniProtKB/TrEMBL
    A0A974HFV6, Q5U5C0
    Related
    ENSXLAP00005049697.1, ENSXLAT00005050838.1
    Conserved Domains (1) summary
    cd10305
    Location:65 → 165
    GST_C_AIMP3; Glutathione S-transferase C-terminal-like, alpha helical domain of Aminoacyl tRNA synthetase complex-Interacting Multifunctional Protein 3

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    94558167..94564633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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