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ric8a.S RIC8 guanine nucleotide exchange factor A S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495192, updated on 4-Nov-2024

Summary

Official Symbol
ric8a.S
Official Full Name
RIC8 guanine nucleotide exchange factor A S homeolog
Primary source
Xenbase:XB-GENE-5745170
Locus tag
XELAEV_18037787mg
See related
EnsemblRapid:ENSXLAG00005011782 AllianceGenome:Xenbase:XB-GENE-5745170
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
Syn; ric-8; ric8a; ric-8A; ric8a-a; ric8a-b; ric8a.L; ricc8aa; xtric-8; synembryn
Summary
Predicted to enable G-protein alpha-subunit binding activity; guanyl-nucleotide exchange factor activity; and protein folding chaperone. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in cytoplasm and plasma membrane. Is expressed in ectoderm; musculoskeletal system; nervous system; pharyngeal arch; and visual system. Orthologous to human RIC8A (RIC8 guanine nucleotide exchange factor A). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

See ric8a.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (97065517..97106061)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (77926794..77967468)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene interferon regulatory factor 3 S homeolog Neighboring gene secretin precursor Neighboring gene achaete-scute family bHLH transcription factor 2 S homeolog Neighboring gene insulin-like growth factor III

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables G-protein alpha-subunit binding IEA
Inferred from Electronic Annotation
more info
 
enables G-protein alpha-subunit binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 
enables guanyl-nucleotide exchange factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein folding chaperone ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
synembryn-A
Names
Protein Ric-8A
RIC8 guanine nucleotide exchange factor A L homeolog
resistance to inhibitors of cholinesterase 8 homolog A a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094881.2NP_001088350.2  synembryn-A

    Status: VALIDATED

    Source sequence(s)
    JAGEVR010000038
    UniProtKB/TrEMBL
    A0A974HAX6
    Related
    ENSXLAP00005034450.1, ENSXLAT00005035333.1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    97065517..97106061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)