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znf593.S zinc finger protein 593 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495155, updated on 17-Aug-2024

Summary

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Official Symbol
znf593.S
Official Full Name
zinc finger protein 593 S homeolog
Primary source
Xenbase:XB-GENE-17335888
Locus tag
XELAEV_18015046mg
See related
EnsemblRapid:ENSXLAG00005008162
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See znf593.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (66732731..66742335)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (62522774..62532555)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C1orf232-like Neighboring gene transforming growth factor beta regulator 1-like Neighboring gene uncharacterized LOC108709514 Neighboring gene connector enhancer of kinase suppressor of Ras 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Zinc finger protein 593-like; uncharacterized protein LOC495155

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094849.1 → NP_001088318.1  Zinc finger protein 593-like

    See identical proteins and their annotated locations for NP_001088318.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084361
    UniProtKB/TrEMBL
    A0A974DID4, Q5XGS1, Q7ZYS0
    Related
    ENSXLAP00005023426.1, ENSXLAT00005024131.1
    Conserved Domains (1) summary
    COG5112
    Location:11 → 108
    UFD2; U1-like Zn-finger-containing protein [General function prediction only]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    66732731..66742335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018248399.2 → XP_018103888.1  uncharacterized protein LOC495155 isoform X1

    UniProtKB/TrEMBL
    A0A974DID4, Q5XGS1, Q7ZYS0

  2. XM_018248398.2 → XP_018103887.1  uncharacterized protein LOC495155 isoform X1

    UniProtKB/TrEMBL
    A0A974DID4, Q5XGS1, Q7ZYS0

  3. XM_018248400.2 → XP_018103889.1  uncharacterized protein LOC495155 isoform X1

    UniProtKB/TrEMBL
    A0A974DID4, Q5XGS1, Q7ZYS0
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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