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chmp4b.L charged multivesicular body protein 4B L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495125, updated on 17-Aug-2024

Summary

Official Symbol
chmp4b.L
Official Full Name
charged multivesicular body protein 4B L homeolog
Primary source
Xenbase:XB-GENE-6077842
Locus tag
XELAEV_18043991mg
See related
EnsemblRapid:ENSXLAG00005023390
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
chmp4b; chmp4b.S
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Genomic context

Location:
chromosome: 9_10L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (45454225..45467989)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (35133101..35146888)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene peroxisomal membrane protein 4 L homeolog Neighboring gene zinc finger protein 341 L homeolog Neighboring gene microtubule crosslinking factor 2 L homeolog Neighboring gene TBC/LysM-associated domain containing 2 L homeolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within exit from mitosis ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within membrane fission ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within mitotic cytokinesis ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within nuclear membrane reassembly ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within vacuolar transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of ESCRT III complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in midbody IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear envelope ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
charged multivesicular body protein 4b
Names
charged multivesicular body protein 4B S homeolog
chromatin modifying protein 4B
chromatin-modifying protein 4b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094821.1NP_001088290.1  charged multivesicular body protein 4b

    See identical proteins and their annotated locations for NP_001088290.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084312
    UniProtKB/Swiss-Prot
    Q5XGW6
    Related
    ENSXLAP00005069112.1, ENSXLAT00005070646.1
    Conserved Domains (1) summary
    pfam03357
    Location:22158
    Snf7; Snf7

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    45454225..45467989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)