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cmbl.L carboxymethylenebutenolidase homolog L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495096, updated on 4-Nov-2024

Summary

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Official Symbol
cmbl.L
Official Full Name
carboxymethylenebutenolidase homolog L homeolog
Primary source
Xenbase:XB-GENE-5806042
Locus tag
XELAEV_18031364mg
See related
EnsemblRapid:ENSXLAG00005006903 AllianceGenome:Xenbase:XB-GENE-5806042
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cmbl
Summary
Predicted to enable hydrolase activity. Predicted to be located in cytosol. Orthologous to human CMBL (carboxymethylenebutenolidase homolog). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cmbl.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (73937960..73972964)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (68124632..68160323)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100158299 Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene membrane associated ring-CH-type finger 6 L homeolog Neighboring gene rhophilin associated tail protein 1-like L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
carboxymethylenebutenolidase homolog
NP_001088265.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094796.1 → NP_001088265.1  carboxymethylenebutenolidase homolog

    See identical proteins and their annotated locations for NP_001088265.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084267
    UniProtKB/Swiss-Prot
    Q5XH09
    UniProtKB/TrEMBL
    A0A974HFK0
    Related
    ENSXLAP00005020153.1, ENSXLAT00005020599.1
    Conserved Domains (1) summary
    COG0412
    Location:17 → 246
    DLH; Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    73937960..73972964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5XH09.1 GenPept UniProtKB/Swiss-Prot:Q5XH09

Gene LinkOut

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