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atp6ap1.S ATPase, H+ transporting, lysosomal accessory protein 1, gene 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495089, updated on 17-Aug-2024

Summary

Official Symbol
atp6ap1.S
Official Full Name
ATPase, H+ transporting, lysosomal accessory protein 1, gene 1 S homeolog
Primary source
Xenbase:XB-GENE-952455
Locus tag
XELAEV_18021045mg
See related
EnsemblRapid:ENSXLAG00005009974
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ac45; xap3; xap-3; ac45LP; atp6s1; vatps1; atp6ap1; atp6ip1; atp6ap1.1; atp6ap1.1.S
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Genomic context

Location:
chromosome: 3S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (78360166..78397775)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (76930186..76968109)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene leiomodin 2 S homeolog Neighboring gene NADH:ubiquinone oxidoreductase subunit A5 S homeolog Neighboring gene solute carrier family 13 member 1 S homeolog Neighboring gene Ca++-dependent secretion activator 2 S homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
ATPase, H+ transporting, lysosomal accessory protein 1, gene 1 S homeolog
Names
V-ATPase accessory subunit Ac45-like protein
NP_001088258.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094789.1NP_001088258.1  ATPase, H+ transporting, lysosomal accessory protein 1, gene 1 S homeolog

    See identical proteins and their annotated locations for NP_001088258.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084256
    UniProtKB/TrEMBL
    A0A974HR07, Q5XH19
    Related
    ENSXLAP00005029367.1, ENSXLAT00005030107.1
    Conserved Domains (1) summary
    pfam05827
    Location:369409
    ATP-synt_S1; Vacuolar ATP synthase subunit S1 (ATP6S1)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    78360166..78397775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)