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mfsd13a.L major facilitator superfamily domain containing 13A L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495079, updated on 4-Nov-2024

Summary

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Official Symbol
mfsd13a.L
Official Full Name
major facilitator superfamily domain containing 13A L homeolog
Primary source
Xenbase:XB-GENE-956682
Locus tag
XELAEV_18034642mg
See related
EnsemblRapid:ENSXLAG00005013654 AllianceGenome:Xenbase:XB-GENE-956682
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
mfsd13a; tmem180
Summary
Predicted to be located in membrane. Orthologous to human MFSD13A (major facilitator superfamily domain containing 13A). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See mfsd13a.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (25082409..25106875, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (23585611..23610296, complement)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene SUFU negative regulator of hedgehog signaling L homeolog Neighboring gene ARP1 actin related protein 1 homolog A L homeolog Neighboring gene uncharacterized LOC121395357 Neighboring gene ubiquitin carboxyl-terminal hydrolase 36-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
major facilitator superfamily domain containing 13A L homeolog
Names
transmembrane protein 180

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094779.1 → NP_001088248.1  major facilitator superfamily domain containing 13A L homeolog

    See identical proteins and their annotated locations for NP_001088248.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084244
    UniProtKB/TrEMBL
    A0A974CED1, Q5XH31
    Related
    ENSXLAP00005040284.1, ENSXLAT00005041207.1
    Conserved Domains (1) summary
    pfam13347
    Location:23 → 482
    MFS_2; MFS/sugar transport protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    25082409..25106875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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