U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC495071 uncharacterized LOC495071 [ Xenopus laevis (African clawed frog) ]

Gene ID: 495071, updated on 1-Jun-2022

Summary

Go to the top of the page Help
Gene symbol
LOC495071
Gene description
uncharacterized LOC495071
Locus tag
XELAEV_18001577mg
See related
EnsemblRapid:ENSXLAG00005026402
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC495071 in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (131569680..131581094, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694813.1 (4630557..4642188)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene microfibril associated protein 4 gene 1 L homeolog Neighboring gene microfibril associated protein 4 gene 2 L homeolog Neighboring gene uncharacterized LOC121398216 Neighboring gene mitogen-activated protein kinase 7 L homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
Zinc-binding protein A33-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094771.1 → NP_001088240.1  Zinc-binding protein A33-like

    See identical proteins and their annotated locations for NP_001088240.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084235
    UniProtKB/TrEMBL
    Q5XH40
    Related
    ENSXLAP00005078421.1, ENSXLAT00005080012.1
    Conserved Domains (2) summary
    cd00162
    Location:16 → 57
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    cl02614
    Location:270 → 456
    SPRY; SPRY domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    131569680..131581094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials