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shkbp1.L SH3KBP1 binding protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494998, updated on 18-Sep-2024

Summary

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Official Symbol
shkbp1.L
Official Full Name
SH3KBP1 binding protein 1 L homeolog
Primary source
Xenbase:XB-GENE-5815259
Locus tag
XELAEV_18039304mg
See related
EnsemblRapid:ENSXLAG00005023036
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
shkbp1
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Genomic context

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See shkbp1.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (69613509..69639379, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (56116172..56142029, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene estrogen-related receptor gamma-related L homeolog Neighboring gene uncharacterized LOC108698611 Neighboring gene G-protein coupled receptor 4 Neighboring gene G protein-coupled receptor 4 like gene 1 L homeolog Neighboring gene spectrin, beta, non-erythrocytic 4 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein homooligomerization IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
SH3KBP1 binding protein 1 L homeolog; SH3KBP1-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    69613509..69639379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018229095.2 → XP_018084584.1  SH3KBP1-binding protein 1

    UniProtKB/TrEMBL
    A0A1L8F8Z4, A0A974C7K4
    Related
    ENSXLAP00005067943.1, ENSXLAT00005069476.1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001094705.1: Suppressed sequence

    Description
    NM_001094705.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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