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tcaf1.L TRPM8 channel associated factor 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494989, updated on 18-Sep-2024

Summary

Official Symbol
tcaf1.L
Official Full Name
TRPM8 channel associated factor 1 L homeolog
Primary source
Xenbase:XB-GENE-6078820
Locus tag
XELAEV_18017960mg
See related
EnsemblRapid:ENSXLAG00005034733
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tcaf; tcaf1; fam115; fam115a; fam139a
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Genomic context

See tcaf1.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (95673561..95686697)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (80357867..80371003)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene golgin B1 L homeolog Neighboring gene guanylate cyclase activator 1A like L homeolog Neighboring gene TRPM8 channel-associated factor homolog Neighboring gene TRPM8 channel-associated factor homolog

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
TRPM8 channel-associated factor homolog
Names
Protein FAM139A
TRPM8 channel-associated factor 1
family with sequence similarity 115, member A
protein FAM115

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094696.1NP_001088165.1  TRPM8 channel-associated factor homolog

    See identical proteins and their annotated locations for NP_001088165.1

    Status: PROVISIONAL

    Source sequence(s)
    BC084073
    UniProtKB/Swiss-Prot
    Q5XHI4
    UniProtKB/TrEMBL
    A0A974DE77
    Related
    ENSXLAP00005103821.1, ENSXLAT00005105840.1
    Conserved Domains (1) summary
    pfam13402
    Location:520871
    Peptidase_M60; Peptidase M60, enhancin and enhancin-like

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    95673561..95686697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)