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suclg1.L succinate-CoA ligase, alpha subunit L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494796, updated on 17-Aug-2024

Summary

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Official Symbol
suclg1.L
Official Full Name
succinate-CoA ligase, alpha subunit L homeolog
Primary source
Xenbase:XB-GENE-865154
Locus tag
XELAEV_18004807mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
galpha; mtdps9; sucla1; suclg1; suclg1.S
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Genomic context

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Location:
chromosome: 1L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (17030379..17069979, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (532210..572124)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene adrenoceptor alpha 1D L homeolog Neighboring gene catenin alpha 2 L homeolog Neighboring gene leucine rich repeat transmembrane neuronal 1 L homeolog Neighboring gene immunoglobulin kappa variable 3-20-like Neighboring gene probable non-functional immunoglobulin kappa variable 6D-41

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables ligase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
succinate-CoA ligase, alpha subunit L homeolog
Names
succinate-CoA ligase, alpha subunit S homeolog
NP_001088098.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094629.1 → NP_001088098.1  succinate-CoA ligase, alpha subunit L homeolog

    See identical proteins and their annotated locations for NP_001088098.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082922
    UniProtKB/TrEMBL
    Q63ZJ1
    Conserved Domains (1) summary
    cl22543
    Location:48 → 173
    Ligase_CoA; CoA-ligase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    17030379..17069979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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