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fam174a.S family with sequence similarity 174 member A S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494710, updated on 17-Aug-2024

Summary

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Official Symbol
fam174a.S
Official Full Name
family with sequence similarity 174 member A S homeolog
Primary source
Xenbase:XB-GENE-6255337
See related
EnsemblRapid:ENSXLAG00005025690
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
fam174; fam174a; tmem157; fam174a.L
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Genomic context

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See fam174a.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (164163701..164172627, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (148159353..148168275, complement)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene solute carrier organic anion transporter family member 4C1 S homeolog Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 S homeolog Neighboring gene putative nuclease HARBI1 Neighboring gene myb/SANT-like DNA-binding domain-containing protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
membrane protein FAM174
Names
Transmembrane protein 157
family with sequence similarity 174 member A L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    164163701..164172627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018238160.2 → XP_018093649.1  membrane protein FAM174 isoform X2

    UniProtKB/TrEMBL
    A0A8J0U0A7

  2. XM_018238151.2 → XP_018093640.1  membrane protein FAM174 isoform X1

    UniProtKB/Swiss-Prot
    Q640B5
    Related
    ENSXLAP00005076350.1, ENSXLAT00005077941.1

RNA

  1. XR_005965091.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001094550.1: Suppressed sequence

    Description
    NM_001094550.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q640B5.1 GenPept UniProtKB/Swiss-Prot:Q640B5

Gene LinkOut

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