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sh3gl3.L SH3-domain GRB2-like 3 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494702, updated on 4-Nov-2024

Summary

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Official Symbol
sh3gl3.L
Official Full Name
SH3-domain GRB2-like 3 L homeolog
Primary source
Xenbase:XB-GENE-17331132
Locus tag
XELAEV_18018275mg
See related
EnsemblRapid:ENSXLAG00005001895 AllianceGenome:Xenbase:XB-GENE-17331132
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to act upstream of or within synaptic vesicle uncoating. Predicted to be located in several cellular components, including cytoplasm; glutamatergic synapse; and presynapse. Orthologous to human SH3GL3 (SH3 domain containing GRB2 like 3, endophilin A3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See sh3gl3.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (111236714..111269703)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (95790135..95823410)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene HDGF like 3 L homeolog Neighboring gene basonuclin zinc finger protein 1 L homeolog Neighboring gene lamin B3 L homeolog Neighboring gene ADAMTS like 3 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within endocytosis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within synaptic vesicle uncoating IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in presynapse IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Endophilin-A3-like; uncharacterized protein LOC494702

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094542.1 → NP_001088011.1  Endophilin-A3-like

    See identical proteins and their annotated locations for NP_001088011.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082699
    UniProtKB/TrEMBL
    A0A974D7K6, A0A974HT88, Q640D0
    Related
    ENSXLAP00005005691.1, ENSXLAT00005005797.1
    Conserved Domains (2) summary
    cd11803
    Location:224 → 278
    SH3_Endophilin_A; Src homology 3 domain of Endophilin-A
    cl12013
    Location:1 → 178
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    111236714..111269703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018251106.2 → XP_018106595.1  uncharacterized protein LOC494702 isoform X1

    UniProtKB/TrEMBL
    A0A1L8H0P0, A0A974D7K6, A0A974HTN4
    Related
    ENSXLAP00005005694.1, ENSXLAT00005005800.1
Nucleotide Protein Strain
Heading Accession and Version

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