apoa4.L apolipoprotein A4 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: apoa4.L
Official Full Name: apolipoprotein A4 L homeolog
Primary source: Xenbase:XB-GENE-941913
Locus tag: XELAEV_18035465mg
See related: EnsemblRapid:ENSXLAG00005014177
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: apoa4
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Genomic context

Location:: chromosome: 7L

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	7L	NC_054383.1 (83843514..83847409)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	7L	NC_030736.1 (75273796..75277775)

Chromosome 7L - NC_054383.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables lipid binding	IEA Inferred from Electronic Annotation more info
enables phosphatidylcholine binding	IEA Inferred from Electronic Annotation more info
enables phosphatidylcholine-sterol O-acyltransferase activator activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within cholesterol efflux	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cholesterol homeostasis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within lipid transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within lipoprotein metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within phosphatidylcholine metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within phospholipid efflux	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of fatty acid biosynthetic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of lipoprotein lipase activity	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of triglyceride catabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of intestinal cholesterol absorption	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within reverse cholesterol transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within triglyceride homeostasis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within very-low-density lipoprotein particle remodeling	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in blood microparticle	IEA Inferred from Electronic Annotation more info
part_of chylomicron	IEA Inferred from Electronic Annotation more info
located_in extracellular region	IEA Inferred from Electronic Annotation more info
part_of high-density lipoprotein particle	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: apolipoprotein A4 L homeolog

Names: apolipoprotein A-IV

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094535.2 → NP_001088004.1 apolipoprotein A4 L homeolog precursor

See identical proteins and their annotated locations for NP_001088004.1

Status: PROVISIONAL

Source sequence(s)

BC084126

UniProtKB/TrEMBL

A0A974HC44, Q5XHD2

Related

ENSXLAP00005041701.1, ENSXLAT00005042700.1

Conserved Domains (2) summary

pfam01442
Location:66 → 234

Apolipoprotein; Apolipoprotein A1/A4/E domain

cl21509
Location:140 → 269

ApoLp-III_like; Apolipophorin-III and similar insect proteins