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shcbp1.L SHC SH2-domain binding protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 494685, updated on 4-Nov-2024

Summary

Official Symbol
shcbp1.L
Official Full Name
SHC SH2-domain binding protein 1 L homeolog
Primary source
Xenbase:XB-GENE-5807734
Locus tag
XELAEV_18022779mg
See related
EnsemblRapid:ENSXLAG00005017245 AllianceGenome:Xenbase:XB-GENE-5807734
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
shcbp1; shcbp1-a; shcbp1-b
Summary
Predicted to act upstream of or within fibroblast growth factor receptor signaling pathway and regulation of neural precursor cell proliferation. Predicted to be located in cytoplasm; midbody; and spindle. Orthologous to human SHCBP1 (SHC binding and spindle associated 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See shcbp1.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (66643894..66680496)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (61428373..61465056)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene histamine H3 receptor Neighboring gene VPS35 retromer complex component L homeolog Neighboring gene uncharacterized LOC121403028 Neighboring gene ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 L homeolog

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in midbody IEA
Inferred from Electronic Annotation
more info
 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
SHC SH2 domain-binding protein 1 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094527.1NP_001087996.1  SHC SH2 domain-binding protein 1 homolog B

    See identical proteins and their annotated locations for NP_001087996.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082676
    UniProtKB/Swiss-Prot
    Q640F2
    UniProtKB/TrEMBL
    A0A974D5L2
    Related
    ENSXLAP00005050896.1, ENSXLAT00005052059.1
    Conserved Domains (1) summary
    pfam13229
    Location:433560
    Beta_helix; Right handed beta helix region

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    66643894..66680496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018256849.2XP_018112338.1  SHC SH2 domain-binding protein 1 homolog B isoform X1

    UniProtKB/TrEMBL
    A0A8J0UZC7, A0A974D5L2