Taar7c trace amine-associated receptor 7C [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Taar7cprovided by RGD
Official Full Name: trace amine-associated receptor 7Cprovided by RGD
Primary source: RGD:1359258
See related: EnsemblRapid:ENSRNOG00000091206 AllianceGenome:RGD:1359258
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to enable trace-amine receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Oct 2024]
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Genomic context

Location:: 1p12

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (23248612..23249688, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (21429364..21430440, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (22507094..22508170, complement)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Expression of Taar family members is limited to specific tissue subpopulations and developmental stages in mouse.
Title: Expression of trace amine-associated receptors in the Grueneberg ganglion.

Submit: New GeneRIF Correction

General gene information

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Markers

Taar7a (e-PCR), detects polymorphism
- UniSTS:516841

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables trace-amine receptor activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in G protein-coupled receptor signaling pathway	IBA Inferred from Biological aspect of Ancestor more info
involved_in G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: trace amine-associated receptor 7c

Names: taR-7c; trace amine associated receptor 7c; trace amine receptor 7c

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001009975.1 → NP_001009975.1 trace amine-associated receptor 7c

See identical proteins and their annotated locations for NP_001009975.1

Status: PROVISIONAL

Source sequence(s)

AY702320

UniProtKB/Swiss-Prot

Q5QD21, Q923X6

UniProtKB/TrEMBL

A6JUM4

Related

ENSRNOP00000041914.2, ENSRNOT00000050763.4

Conserved Domains (2) summary

pfam00001
Location:64 → 326

7tm_1; 7 transmembrane receptor (rhodopsin family)

cl21561
Location:54 → 184

7tm_4; Olfactory receptor