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PFJ30894_RS09495 carbohydrate-binding protein [ Phascolarctobacterium faecium ]

Gene ID: 49407584, updated on 10-Oct-2024

Summary

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Gene symbol
PFJ30894_RS09495
Gene description
carbohydrate-binding protein
Locus tag
PFJ30894_RS09495
Gene type
protein coding
Organism
Phascolarctobacterium faecium (strain: JCM 30894)
Lineage
Bacteria; Bacillota; Negativicutes; Acidaminococcales; Acidaminococcaceae; Phascolarctobacterium
Old locus tag
PFJ30894_01927
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Genomic context

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NZ_AP019004.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene N-acetylmuramoyl-L-alanine amidase Neighboring gene phage holin family protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene phage tail domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_AP019004.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-based analysis of domain function of chitin oligosaccharide deacetylase from Vibrio parahaemolyticus. Hirano T, et al. FEBS Lett, 2015 Jan 2. PMID 25479092
  2. Solution structure of the chitin-binding domain 1 (ChBD1) of a hyperthermophilic chitinase from Pyrococcus furiosus. Mine S, et al. J Biochem, 2014 Feb. PMID 24272751
  3. Structural studies of a two-domain chitinase from Streptomyces griseus HUT6037. Kezuka Y, et al. J Mol Biol, 2006 Apr 28. PMID 16516924
  4. Solution structure of the chitin-binding domain of Bacillus circulans WL-12 chitinase A1. Ikegami T, et al. J Biol Chem, 2000 May 5. PMID 10788483
  5. Identification of the substrate interaction region of the chitin-binding domain of Streptomyces griseus chitinase C. Akagi K, et al. J Biochem, 2006 Mar. PMID 16567413

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
carbohydrate-binding protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_AP019004.1 Reference assembly

    Range
    1968432..1969070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_125669678.1 carbohydrate-binding protein [Phascolarctobacterium faecium]

    UniProtKB/TrEMBL
    A0AAN1SWC4
    Conserved Domains (1) summary
    cd12214
    Location:105 → 150
    ChiA1_BD; chitin-binding domain of Chi A1-like proteins
Nucleotide Protein
Heading Accession and Version