U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

XYLT2 xylosyltransferase 2 [ Canis lupus familiaris (dog) ]

Gene ID: 493990, updated on 17-Aug-2024

Summary

Official Symbol
XYLT2provided by VGNC
Official Full Name
xylosyltransferase 2provided by VGNC
Primary source
VGNC:VGNC:48476
See related
Ensembl:ENSCAFG00845012646
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
xt-II
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See XYLT2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (27111261..27123755)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (25709840..25722329)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (26267695..26280219)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (25879022..25891537)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (26137674..26150182)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U2-30 Neighboring gene transmembrane protein 92 Neighboring gene mitochondrial ribosomal protein L27 Neighboring gene essential meiotic structure-specific endonuclease 1 Neighboring gene leucine rich repeat containing 59

Genomic regions, transcripts, and products

General protein information

Preferred Names
xylosyltransferase 2
Names
peptide O-xylosyltransferase 2
xylosyltransferase II
NP_001008714.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008714.1NP_001008714.1  xylosyltransferase 2

    See identical proteins and their annotated locations for NP_001008714.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ866725
    UniProtKB/Swiss-Prot
    Q5QQ50
    UniProtKB/TrEMBL
    A0A8C0LFY5, A0A8C0SAP2
    Related
    ENSCAFP00845017674.1, ENSCAFT00845022508.1
    Conserved Domains (2) summary
    pfam02485
    Location:234486
    Branch; Core-2/I-Branching enzyme
    pfam12529
    Location:519699
    Xylo_C; Xylosyltransferase C terminal

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    27111261..27123755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    25879022..25891537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    26137674..26150182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    26267695..26280219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    25709840..25722329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)