FUT6 fucosyltransferase 6 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: FUT6provided by VGNC
Official Full Name: fucosyltransferase 6provided by VGNC
Primary source: VGNC:VGNC:6627
Locus tag: CK820_G0045078
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human all
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Genomic context

Location:: chromosome: 20

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	20	NC_072418.2 (8180267..8181346, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	19	NC_072417.1 (8180309..8181388, complement)

Chromosome 20 - NC_072418.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

FUT6_663 (e-PCR)
- UniSTS:277258

FUT6_V46 (e-PCR)
- UniSTS:277258

SGC35572 (e-PCR)
- UniSTS:9344

RH80293 (e-PCR)
- UniSTS:85240

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables alpha-(1->3)-fucosyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in fucosylation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein glycosylation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT6

Names: alpha-(1,3)-fucosyltransferase 6; alpha-3-L-fucosyltransferase; fuc-TVI; fucT-VI; fucosyltransferase 6 (alpha (1,3) fucosyltransferase); fucosyltransferase VI; galactoside 3-L-fucosyltransferase

NP_001009150.1

EC 2.4.1.152

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001009150.1 → NP_001009150.1 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase FUT6

See identical proteins and their annotated locations for NP_001009150.1

Status: PROVISIONAL

Source sequence(s)

Y14035

UniProtKB/Swiss-Prot

P56434

UniProtKB/TrEMBL

A0A2J8JRG3

Conserved Domains (2) summary

pfam00852
Location:188 → 351

Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term

pfam17039
Location:62 → 169

Glyco_tran_10_N; Fucosyltransferase, N-terminal

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

8180267..8181346 complement

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GenBank, FASTA, Sequence Viewer (Graphics)