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CNBI3400 hypothetical protein [ Cryptococcus neoformans var. neoformans B-3501A ]

Gene ID: 4938302, updated on 17-May-2024

Summary

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Gene symbol
CNBI3400
Gene description
hypothetical protein
Locus tag
CNBI3400
See related
FungiDB:CNBI3400; VEuPathDB:CNBI3400
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans B-3501A (strain: B-3501A, variety: neoformans, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNBI3400 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Sequence:
Chromosome: 9; NC_009185.1 (1017849..1020334)

Chromosome 9 - NC_009185.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009185.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
hypothetical protein
XP_773401.1
  • Match to ESTs gb|CF189662.1|CF189662, gb|CF193456.1|CF193456; Similar to gi|46096107|gb|EAK81340.1| hypothetical protein UM00429.1 [Ustilago maydis 521], FASTA scores: opt: 2262, E(): 2.1e-139, (59.200% identity (78.400% similar) in 625 aa overlap (13-623:2-590)); HMMPfam hit to Glyco_transf_20, Glycosyltransferase family 20, score: 779.8, E(): 1.3e-231
XP_773402.1
  • Match to ESTs gb|CF193456.1|CF193456, gb|CF189662.1|CF189662, gb|CF194504.1|CF194504; Similar to gi|46096107|gb|EAK81340.1| hypothetical protein UM00429.1 [Ustilago maydis 521], FASTA scores: opt: 2436, E(): 1.5e-148, (60.064% identity (80.831% similar) in 626 aa overlap (13-619:2-613)); HMMPfam hit to Glyco_transf_20, Glycosyltransferase family 20, score: 839.3, E(): 1.6e-249

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009185.1 Reference assembly

    Range
    1017849..1020334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_768308.1 → XP_773401.1  hypothetical protein CNBI3400 [Cryptococcus neoformans var. neoformans B-3501A]

    See identical proteins and their annotated locations for XP_773401.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6IVK9
    Conserved Domains (2) summary
    cd03788
    Location:58 → 623
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    pfam00982
    Location:57 → 623
    Glyco_transf_20; Glycosyltransferase family 20

  2. XM_768309.1 → XP_773402.1  hypothetical protein CNBI3400 [Cryptococcus neoformans var. neoformans B-3501A]

    See identical proteins and their annotated locations for XP_773402.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q55LL9, Q5KD58, Q6IVK9
    Conserved Domains (2) summary
    cd03788
    Location:58 → 603
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    pfam00982
    Location:57 → 604
    Glyco_transf_20; Glycosyltransferase family 20
Nucleotide Protein
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