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yipf2 Yip1 domain family member 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 493440, updated on 18-Sep-2024

Summary

Official Symbol
yipf2provided by Xenbase
Official Full Name
Yip1 domain family member 2provided by Xenbase
Primary source
Xenbase:XB-GENE-997076
See related
Ensembl:ENSXETG00000009356
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

See yipf2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (138877947..138884619, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (128036512..128042350, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene protein HIDE1-like Neighboring gene coactivator associated arginine methyltransferase 1 Neighboring gene translocase of inner mitochondrial membrane 29 Neighboring gene tctex1 domain-containing protein 2

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC79788

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008077.1NP_001008078.1  protein YIPF2

    See identical proteins and their annotated locations for NP_001008078.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080977
    UniProtKB/TrEMBL
    A0A7D9NKU4, Q66JC3
    Related
    ENSXETP00000058855.2, ENSXETT00000060800.3
    Conserved Domains (1) summary
    pfam04893
    Location:79261
    Yip1; Yip1 domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    138877947..138884619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)