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CNBA3620 hypothetical protein [ Cryptococcus neoformans var. neoformans B-3501A ]

Gene ID: 4933620, updated on 17-May-2024

Summary

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Gene symbol
CNBA3620
Gene description
hypothetical protein
Locus tag
CNBA3620
See related
FungiDB:CNBA3620; VEuPathDB:CNBA3620
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans B-3501A (strain: B-3501A, variety: neoformans, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNBA3620 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Sequence:
Chromosome: 1; NC_009177.1 (1018997..1021912, complement)

Chromosome 1 - NC_009177.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009177.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
hypothetical protein
XP_777893.1
  • Match to ESTs gb|CF193373.1|CF193373, gb|CF187609.1|CF187609, gb|CF188976.1|CF188976; Similar to gi|46100505|gb|EAK85738.1| hypothetical protein UM04470.1 [Ustilago maydis 521], FASTA scores: opt: 3357, E(): 2.4e-212, (68.296% identity (87.852% similar) in 675 aa overlap (7-680:22-695)); HMMPfam hit to Isoamylase_N, Isoamylase N-terminal domain, score: 94.9, E(): 2e-25

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009177.1 Reference assembly

    Range
    1018997..1021912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_772800.1 → XP_777893.1  hypothetical protein CNBA3620 [Cryptococcus neoformans var. neoformans B-3501A]

    See identical proteins and their annotated locations for XP_777893.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CN82, P0CN83, Q55ZX8, Q5KP87
    UniProtKB/TrEMBL
    A0A226A0A7
    Conserved Domains (4) summary
    cd02854
    Location:64 → 160
    E_set_GBE_euk_N; N-terminal Early set domain associated with the catalytic domain of eukaryotic glycogen branching enzyme (also called 1,4 alpha glucan branching enzyme)
    cd11321
    Location:165 → 569
    AmyAc_bac_euk_BE; Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes
    COG0296
    Location:54 → 682
    GlgB; 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
    pfam02806
    Location:588 → 680
    Alpha-amylase_C; Alpha amylase, C-terminal all-beta domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CN83.1

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