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phospho2 phosphatase, orphan 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 493318, updated on 5-Mar-2024

Summary

Official Symbol
phospho2provided by Xenbase
Official Full Name
phosphatase, orphan 2provided by Xenbase
Primary source
Xenbase:XB-GENE-1002120
See related
Ensembl:ENSXETG00000018895
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

See phospho2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (68441490..68446232, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (63322511..63327969, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene methyltransferase 5, N6-adenosine Neighboring gene Sjogren syndrome antigen B Neighboring gene kelch like family member 23 Neighboring gene cilia and flagella associated protein 210 Neighboring gene peptidylprolyl isomerase G (cyclophilin G)

Genomic regions, transcripts, and products

General protein information

Preferred Names
probable phosphatase phospho2
NP_001007942.1
XP_012825780.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007941.2NP_001007942.1  probable phosphatase phospho2

    See identical proteins and their annotated locations for NP_001007942.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080449
    UniProtKB/Swiss-Prot
    Q66KD6
    Related
    ENSXETP00000040976.2, ENSXETT00000040976.4
    Conserved Domains (1) summary
    cl21460
    Location:3236
    HAD_like; Haloacid Dehalogenase-like Hydrolases

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    68441490..68446232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012970326.3XP_012825780.1  probable phosphatase phospho2 isoform X1

    See identical proteins and their annotated locations for XP_012825780.1

    UniProtKB/Swiss-Prot
    Q66KD6
    Related
    ENSXETP00000108120.1, ENSXETT00000108896.1
    Conserved Domains (1) summary
    cl21460
    Location:3236
    HAD_like; Haloacid Dehalogenase-like Hydrolases