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pelI pectate lyase PelI [ Dickeya dianthicola ]

Gene ID: 49322981, updated on 10-Oct-2024

Summary

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Gene symbol
pelI
Gene description
pectate lyase PelI
Locus tag
DZA65_RS15805
Gene type
protein coding
Organism
Dickeya dianthicola (strain: ME23, nat-host: Potato)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya
Old locus tag
DZA65_03075
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Genomic context

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NZ_CP031560.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene D-mannonate dehydratase ManD Neighboring gene Zn-dependent oxidoreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP031560.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The crystal structure of pectate lyase peli from soft rot pathogen Erwinia chrysanthemi in complex with its substrate. Creze C, et al. J Biol Chem, 2008 Jun 27. PMID 18430740
  2. Pectate lyase PelI of Erwinia chrysanthemi 3937 belongs to a new family. Shevchik VE, et al. J Bacteriol, 1997 Dec. PMID 9393696, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pectate lyase PelI
WP_024106704.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP031560.1 Reference assembly

    Range
    3431580..3432620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_024106704.1 pectate lyase PelI [Dickeya dianthicola]

    UniProtKB/TrEMBL
    A0AAP2GE22
    Conserved Domains (1) summary
    pfam03211
    Location:109 → 319
    Pectate_lyase; Pectate lyase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases