rdm1 RAD52 motif containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rdm1provided by ZNC
Official Full Name: RAD52 motif containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-041114-14
See related: Ensembl:ENSDARG00000038186 AllianceGenome:ZFIN:ZDB-GENE-041114-14
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:103564
Summary: Predicted to enable DNA binding activity and RNA binding activity. Predicted to be located in cytoplasm and nucleus. Predicted to be active in nucleolus. Orthologous to human RDM1 (RAD52 motif containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 3

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (22335043..22341104)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (22204495..22210556)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
is_active_in nucleolus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: RAD52 motif-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001007333.1 → NP_001007334.1 RAD52 motif-containing protein 1

See identical proteins and their annotated locations for NP_001007334.1

Status: PROVISIONAL

Source sequence(s)

BC085554

UniProtKB/Swiss-Prot

Q5U3G4

UniProtKB/TrEMBL

B2GQ78

Related

ENSDARP00000055675.3, ENSDART00000055676.4

Conserved Domains (1) summary

cd12364
Location:18 → 98

RRM_RDM1; RNA recognition motif of RAD52 motif-containing protein 1 (RDM1) and similar proteins