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PSMD3 proteasome 26S subunit, non-ATPase 3 [ Canis lupus familiaris (dog) ]

Gene ID: 491018, updated on 17-Aug-2024

Summary

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Official Symbol
PSMD3provided by VGNC
Official Full Name
proteasome 26S subunit, non-ATPase 3provided by VGNC
Primary source
VGNC:VGNC:45112
See related
Ensembl:ENSCAFG00845010417
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PSMD3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (23330997..23345916, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (22010317..22025182, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (22488121..22502997, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (22104354..22119263, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (22363560..22378432, complement)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 24 Neighboring gene small nucleolar RNA SNORD124 Neighboring gene colony stimulating factor 3 Neighboring gene uncharacterized LOC111097357 Neighboring gene gasdermin A Neighboring gene leucine rich repeat containing 3C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, lid subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome non-ATPase regulatory subunit 3
Names
proteasome (prosome, macropain) 26S subunit, non-ATPase, 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    23330997..23345916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038676582.1 → XP_038532510.1  26S proteasome non-ATPase regulatory subunit 3

    UniProtKB/TrEMBL
    A0A8C0L350, A0A8C0NBP8, A0A8C0PP61, A0A8I3NH42
    Related
    ENSCAFP00845014318.1, ENSCAFT00845018343.1
    Conserved Domains (2) summary
    pfam01399
    Location:358 → 462
    PCI; PCI domain
    pfam08375
    Location:465 → 523
    Rpn3_C; Proteasome regulatory subunit C-terminal

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    22104354..22119263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038485638.1 → XP_038341566.1  26S proteasome non-ATPase regulatory subunit 3

    Conserved Domains (2) summary
    pfam01399
    Location:358 → 462
    PCI; PCI domain
    pfam08375
    Location:465 → 523
    Rpn3_C; Proteasome regulatory subunit C-terminal

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    22363560..22378432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038611388.1 → XP_038467316.1  26S proteasome non-ATPase regulatory subunit 3

    Conserved Domains (2) summary
    pfam01399
    Location:358 → 462
    PCI; PCI domain
    pfam08375
    Location:465 → 523
    Rpn3_C; Proteasome regulatory subunit C-terminal

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    22488121..22502997 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038547405.1 → XP_038403333.1  26S proteasome non-ATPase regulatory subunit 3

    UniProtKB/TrEMBL
    A0A8C0L350, A0A8C0NBP8, A0A8C0PP61, A0A8I3NH42
    Conserved Domains (2) summary
    pfam01399
    Location:358 → 462
    PCI; PCI domain
    pfam08375
    Location:465 → 523
    Rpn3_C; Proteasome regulatory subunit C-terminal

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    22010317..22025182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_548138.7 → XP_548138.2  26S proteasome non-ATPase regulatory subunit 3

    UniProtKB/TrEMBL
    A0A8C0L350, A0A8C0NBP8, A0A8C0PP61, A0A8I3NH42
    Conserved Domains (2) summary
    pfam01399
    Location:358 → 462
    PCI; PCI domain
    pfam08375
    Location:465 → 523
    Rpn3_C; Proteasome regulatory subunit C-terminal
Nucleotide Protein
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