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KCNA3 potassium voltage-gated channel subfamily A member 3 [ Canis lupus familiaris (dog) ]

Gene ID: 490110, updated on 17-Aug-2024

Summary

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Official Symbol
KCNA3provided by VGNC
Official Full Name
potassium voltage-gated channel subfamily A member 3provided by VGNC
Primary source
VGNC:VGNC:42230
See related
Ensembl:ENSCAFG00845001875
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See KCNA3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (41675464..41695170)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (44120679..44140399)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (41801395..41821138)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (41395369..41415083)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (41366130..41385831)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096342 Neighboring gene uncharacterized LOC111096343 Neighboring gene potassium voltage-gated channel subfamily A member 2 Neighboring gene potassium voltage-gated channel subfamily A member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables delayed rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated potassium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium voltage-gated channel subfamily A member 3
Names
potassium voltage-gated channel, shaker-related subfamily, member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    41675464..41695170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038669830.1 → XP_038525758.1  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  2. XM_038669831.1 → XP_038525759.1  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  3. XM_038669829.1 → XP_038525757.1  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Related
    ENSCAFP00845002602.1, ENSCAFT00845003280.1
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    41395369..41415083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038479758.1 → XP_038335686.1  potassium voltage-gated channel subfamily A member 3

    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  2. XM_038479759.1 → XP_038335687.1  potassium voltage-gated channel subfamily A member 3

    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  3. XM_038479757.1 → XP_038335685.1  potassium voltage-gated channel subfamily A member 3

    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    41366130..41385831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038605157.1 → XP_038461085.1  potassium voltage-gated channel subfamily A member 3

    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  2. XM_038605158.1 → XP_038461086.1  potassium voltage-gated channel subfamily A member 3

    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  3. XM_038605156.1 → XP_038461084.1  potassium voltage-gated channel subfamily A member 3

    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    41801395..41821138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038541029.1 → XP_038396957.1  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  2. XM_038541030.1 → XP_038396958.1  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  3. XM_038541028.1 → XP_038396956.1  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    44120679..44140399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038551864.1 → XP_038407792.1  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  2. XM_038551865.1 → XP_038407793.1  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein

  3. XM_003434830.5 → XP_003434878.3  potassium voltage-gated channel subfamily A member 3

    UniProtKB/TrEMBL
    A0A8C0RKX9, A0A8C0YXC8, A0A8I3MLJ0
    Conserved Domains (2) summary
    cl38908
    Location:51 → 177
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
    pfam00520
    Location:180 → 435
    Ion_trans; Ion transport protein
Nucleotide Protein
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