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ZNF500 zinc finger protein 500 [ Canis lupus familiaris (dog) ]

Gene ID: 490023, updated on 5-Mar-2024

Summary

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Gene symbol
ZNF500
Gene description
zinc finger protein 500
See related
Ensembl:ENSCAFG00845018727
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human all
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Genomic context

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See ZNF500 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (36849256..36866298)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (38038465..38050534)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (36938629..36955588)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (36644974..36660690)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (36536182..36553427)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene rogdi atypical leucine zipper Neighboring gene small integral membrane protein 22 Neighboring gene septin 12 Neighboring gene dynein axonemal assembly factor 8 Neighboring gene ankyrin repeat and sterile alpha motif domain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger protein 500; zinc finger protein 500

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    36849256..36866298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038669288.1 → XP_038525216.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  2. XM_038669290.1 → XP_038525218.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  3. XM_038669289.1 → XP_038525217.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  4. XM_038669285.1 → XP_038525213.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  5. XM_038669291.1 → XP_038525219.1  zinc finger protein 500 isoform X2

    Conserved Domains (4) summary
    cd07765
    Location:233 → 265
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:277 → 460
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:317 → 337
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  6. XM_038669292.1 → XP_038525220.1  zinc finger protein 500 isoform X3

    UniProtKB/TrEMBL
    A0A8I3P4J3
    Related
    ENSCAFP00845025897.1, ENSCAFT00845033086.1
    Conserved Domains (4) summary
    cd07765
    Location:223 → 255
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:267 → 450
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:307 → 327
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 148
    SCAN; SCAN oligomerization domain

  7. XM_038669293.1 → XP_038525221.1  zinc finger protein 500 isoform X4

    Conserved Domains (4) summary
    cd07765
    Location:222 → 254
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:266 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:306 → 326
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 148
    SCAN; SCAN oligomerization domain

  8. XM_038669286.1 → XP_038525214.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  9. XM_038669287.1 → XP_038525215.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  10. XM_038669294.1 → XP_038525222.1  zinc finger protein 500 isoform X5

    Conserved Domains (3) summary
    cd07765
    Location:126 → 158
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:170 → 353
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:210 → 230
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    36644974..36660690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038479262.1 → XP_038335190.1  LOW QUALITY PROTEIN: zinc finger protein 500 isoform X4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    36536182..36553427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038604598.1 → XP_038460526.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  2. XM_038604601.1 → XP_038460529.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  3. XM_038604600.1 → XP_038460528.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  4. XM_038604596.1 → XP_038460524.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  5. XM_038604602.1 → XP_038460530.1  zinc finger protein 500 isoform X2

    Conserved Domains (4) summary
    cd07765
    Location:233 → 265
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:277 → 460
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:317 → 337
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  6. XM_038604603.1 → XP_038460531.1  zinc finger protein 500 isoform X3

    Conserved Domains (4) summary
    cd07765
    Location:223 → 255
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:267 → 450
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:307 → 327
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 148
    SCAN; SCAN oligomerization domain

  7. XM_038604604.1 → XP_038460532.1  zinc finger protein 500 isoform X4

    Conserved Domains (4) summary
    cd07765
    Location:222 → 254
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:266 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:306 → 326
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 148
    SCAN; SCAN oligomerization domain

  8. XM_038604597.1 → XP_038460525.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  9. XM_038604599.1 → XP_038460527.1  zinc finger protein 500 isoform X1

    Conserved Domains (4) summary
    cd07765
    Location:234 → 266
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
    COG5048
    Location:278 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:318 → 338
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  10. XM_038604605.1 → XP_038460533.1  zinc finger protein 500 isoform X5

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    36938629..36955588
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038540502.1 → XP_038396430.1  zinc finger protein 500 isoform X1

  2. XM_038540504.1 → XP_038396432.1  zinc finger protein 500 isoform X1

  3. XM_038540500.1 → XP_038396428.1  zinc finger protein 500 isoform X1

  4. XM_038540505.1 → XP_038396433.1  zinc finger protein 500 isoform X2

  5. XM_038540506.1 → XP_038396434.1  zinc finger protein 500 isoform X3

  6. XM_038540507.1 → XP_038396435.1  zinc finger protein 500 isoform X4

  7. XM_038540501.1 → XP_038396429.1  zinc finger protein 500 isoform X1

  8. XM_038540503.1 → XP_038396431.1  zinc finger protein 500 isoform X1

  9. XM_038540508.1 → XP_038396436.1  zinc finger protein 500 isoform X5

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    38038465..38050534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038548147.1 → XP_038404075.1  zinc finger protein 500 isoform X6

    Conserved Domains (1) summary
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  2. XM_038548138.1 → XP_038404066.1  zinc finger protein 500 isoform X6

    Conserved Domains (1) summary
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  3. XM_038548152.1 → XP_038404080.1  zinc finger protein 500 isoform X6

    Conserved Domains (1) summary
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  4. XM_038548132.1 → XP_038404060.1  zinc finger protein 500 isoform X6

    Conserved Domains (1) summary
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  5. XM_038548160.1 → XP_038404088.1  zinc finger protein 500 isoform X7

    Conserved Domains (1) summary
    cl02605
    Location:42 → 148
    SCAN; SCAN oligomerization domain

  6. XM_038548137.1 → XP_038404065.1  zinc finger protein 500 isoform X6

    Conserved Domains (1) summary
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

  7. XM_038548145.1 → XP_038404073.1  zinc finger protein 500 isoform X6

    Conserved Domains (1) summary
    cl02605
    Location:42 → 159
    SCAN; SCAN oligomerization domain

RNA

  1. XR_005364690.1 RNA Sequence

Nucleotide Protein
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