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MRC1 mannose receptor C-type 1 [ Canis lupus familiaris (dog) ]

Gene ID: 487114, updated on 17-Aug-2024

Summary

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Official Symbol
MRC1provided by VGNC
Official Full Name
mannose receptor C-type 1provided by VGNC
Primary source
VGNC:VGNC:43359
See related
Ensembl:ENSCAFG00845013649
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
MRC1L1
Orthologs
human mouse all
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Genomic context

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See MRC1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
31
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (19382161..19474894, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (16192173..16287442, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (18038475..18133728, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (16582950..16678085, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (17418222..17513475, complement)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit beta 2 Neighboring gene uncharacterized LOC111091415 Neighboring gene solute carrier family 39 member 12 Neighboring gene uncharacterized LOC111094515 Neighboring gene transmembrane protein 236

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
macrophage mannose receptor 1
Names
mannose receptor, C type 1-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    19382161..19474894 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038660397.1 → XP_038516325.1  macrophage mannose receptor 1 isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXN0
    Related
    ENSCAFP00845019120.1, ENSCAFT00845024335.1
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:647 → 767
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:932 → 1067
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    16582950..16678085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038469250.1 → XP_038325178.1  macrophage mannose receptor 1 isoform X3

  2. XM_038469249.1 → XP_038325177.1  macrophage mannose receptor 1 isoform X2

  3. XM_038469248.1 → XP_038325176.1  macrophage mannose receptor 1 isoform X2

  4. XM_038469251.1 → XP_038325179.1  macrophage mannose receptor 1 isoform X4

  5. XM_038469246.1 → XP_038325174.1  macrophage mannose receptor 1 isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    17418222..17513475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038594249.1 → XP_038450177.1  macrophage mannose receptor 1 isoform X6

  2. XM_038594248.1 → XP_038450176.1  macrophage mannose receptor 1 isoform X5

    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

  3. XM_038594247.1 → XP_038450175.1  macrophage mannose receptor 1 isoform X5

    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

  4. XM_038594250.1 → XP_038450178.1  macrophage mannose receptor 1 isoform X7

    Conserved Domains (4) summary
    smart00059
    Location:95 → 143
    FN2; Fibronectin type 2 domain
    cd00037
    Location:593 → 713
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:878 → 1013
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:1 → 76
    RICIN; Ricin-type beta-trefoil

  5. XM_038594246.1 → XP_038450174.1  macrophage mannose receptor 1 isoform X5

    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    18038475..18133728 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038529986.1 → XP_038385914.1  macrophage mannose receptor 1 isoform X9

    UniProtKB/TrEMBL
    A0A8C0PXL7, A0A8C0RIM6

  2. XM_038529985.1 → XP_038385913.1  macrophage mannose receptor 1 isoform X8

    UniProtKB/TrEMBL
    A0A8C0QY22, A0A8P0SVN3
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

  3. XM_038529984.1 → XP_038385912.1  macrophage mannose receptor 1 isoform X8

    UniProtKB/TrEMBL
    A0A8C0QY22, A0A8P0SVN3
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

  4. XM_038529987.1 → XP_038385915.1  macrophage mannose receptor 1 isoform X10

    UniProtKB/TrEMBL
    A0A8C0K9B7
    Conserved Domains (4) summary
    smart00059
    Location:95 → 143
    FN2; Fibronectin type 2 domain
    cd00037
    Location:593 → 713
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:878 → 1013
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:1 → 76
    RICIN; Ricin-type beta-trefoil

  5. XM_038529983.1 → XP_038385911.1  macrophage mannose receptor 1 isoform X8

    UniProtKB/TrEMBL
    A0A8C0QY22, A0A8P0SVN3
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    16192173..16287442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005617093.4 → XP_005617150.1  macrophage mannose receptor 1 isoform X12

    UniProtKB/TrEMBL
    A0A8C0PXL7, A0A8C0RIM6
    Conserved Domains (4) summary
    smart00059
    Location:161 → 209
    FN2; Fibronectin type 2 domain
    cd00037
    Location:659 → 779
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:944 → 1079
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:27 → 142
    RICIN; Ricin-type beta-trefoil

  2. XM_005617092.4 → XP_005617149.1  macrophage mannose receptor 1 isoform X11

    See identical proteins and their annotated locations for XP_005617149.1

    UniProtKB/TrEMBL
    A0A8C0QY22, A0A8P0SVN3
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

  3. XM_038456698.1 → XP_038312626.1  macrophage mannose receptor 1 isoform X11

    UniProtKB/TrEMBL
    A0A8C0QY22, A0A8P0SVN3
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil

  4. XM_038456703.1 → XP_038312631.1  macrophage mannose receptor 1 isoform X13

    UniProtKB/TrEMBL
    A0A8C0K9B7
    Conserved Domains (4) summary
    smart00059
    Location:95 → 143
    FN2; Fibronectin type 2 domain
    cd00037
    Location:593 → 713
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:878 → 1013
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:1 → 76
    RICIN; Ricin-type beta-trefoil

  5. XM_005617091.4 → XP_005617148.1  macrophage mannose receptor 1 isoform X11

    See identical proteins and their annotated locations for XP_005617148.1

    UniProtKB/TrEMBL
    A0A8C0QY22, A0A8P0SVN3
    Conserved Domains (4) summary
    smart00059
    Location:181 → 229
    FN2; Fibronectin type 2 domain
    cd00037
    Location:679 → 799
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:964 → 1099
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:47 → 162
    RICIN; Ricin-type beta-trefoil
Nucleotide Protein
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