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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051825.1 Reference ROS_Cfam_1.0
- Range
-
25611832..25635160 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038430205.1 → XP_038286133.1 protein Atg16l2 isoform X5
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:301 → 580
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:311 → 348
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:8 → 177
- ATG16; Autophagy protein 16 (ATG16)
-
XM_038430203.1 → XP_038286131.1 protein Atg16l2 isoform X3
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:305 → 584
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:315 → 352
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
-
XM_038430206.1 → XP_038286134.1 protein Atg16l2 isoform X6
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:305 → 582
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:315 → 352
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
-
XM_038430202.1 → XP_038286130.1 protein Atg16l2 isoform X2
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:326 → 583
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:336 → 373
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
-
XM_038430201.1 → XP_038286129.1 protein Atg16l2 isoform X1
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:326 → 605
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:336 → 373
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
-
XM_038430204.1 → XP_038286132.1 protein Atg16l2 isoform X4
- UniProtKB/TrEMBL
- A0A8C0JM92, A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:326 → 603
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:336 → 373
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049281.1 Alternate UMICH_Zoey_3.1
- Range
-
25401211..25419203 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038505565.1 → XP_038361493.1 LOW QUALITY PROTEIN: protein Atg16l2 isoform X4
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049762.1 Alternate UNSW_CanFamBas_1.0
- Range
-
25604504..25630698 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038632917.1 → XP_038488845.1 protein Atg16l2 isoform X5
-
XM_038632915.1 → XP_038488843.1 protein Atg16l2 isoform X3
-
XM_038632918.1 → XP_038488846.1 protein Atg16l2 isoform X6
-
XM_038632914.1 → XP_038488842.1 protein Atg16l2 isoform X2
-
XM_038632913.1 → XP_038488841.1 protein Atg16l2 isoform X1
-
XM_038632916.1 → XP_038488844.1 protein Atg16l2 isoform X4
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049242.1 Alternate UU_Cfam_GSD_1.0
- Range
-
25521019..25536014 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038568741.1 → XP_038424669.1 LOW QUALITY PROTEIN: protein Atg16l2 isoform X4
- UniProtKB/TrEMBL
- A0A8C0JM92, A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:326 → 603
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:336 → 373
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006603.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
25174599..25197690 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_022407727.2 → XP_022263435.2 protein Atg16l2 isoform X5
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:301 → 580
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:311 → 348
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:8 → 177
- ATG16; Autophagy protein 16 (ATG16)
-
XM_014122513.3 → XP_013977988.2 protein Atg16l2 isoform X3
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:305 → 584
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:315 → 352
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
-
XM_014122515.3 → XP_013977990.2 protein Atg16l2 isoform X6
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:305 → 582
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:315 → 352
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
-
XM_014122512.3 → XP_013977987.2 protein Atg16l2 isoform X2
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:326 → 583
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:336 → 373
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
-
XM_014122510.3 → XP_013977985.2 protein Atg16l2 isoform X1
- UniProtKB/TrEMBL
-
A0A8C0SZL6
- Conserved Domains (3) summary
-
- cd00200
Location:326 → 605
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:336 → 373
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)
-
XM_014122514.3 → XP_013977989.2 protein Atg16l2 isoform X4
- UniProtKB/TrEMBL
- A0A8C0SZL6, A0A8P0NNL9
- Conserved Domains (3) summary
-
- cd00200
Location:326 → 603
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:336 → 373
- 7WD40; WD40 repeat [structural motif]
- pfam08614
Location:26 → 202
- ATG16; Autophagy protein 16 (ATG16)