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WBP1 oligosaccharyl transferase beta subunit precursor [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4851074, updated on 21-Dec-2023

Summary

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Gene symbol
WBP1
Gene description
oligosaccharyl transferase beta subunit precursor
Locus tag
PICST_86222
Gene type
protein coding
RNA name
oligosaccharyl transferase beta subunit precursor
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See WBP1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_009068.1 (877611..879014, complement)

Chromosome 1 - NC_009068.1Genomic Context describing neighboring genes Neighboring gene jun-like transcription factor Neighboring gene putative ADP-ribosylation factor in the carboxypeptidase Y pathway Neighboring gene ubiquitin-like protein Neighboring gene probable 26S proteasome regulatory subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009068.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
oligosaccharyl transferase beta subunit precursor
XP_001387803.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009068.1 Reference assembly

    Range
    877611..879014 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001387766.1 → XP_001387803.2  oligosaccharyl transferase beta subunit precursor [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001387803.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3GFM5
    Conserved Domains (1) summary
    pfam03345
    Location:31 → 439
    DDOST_48kD; Oligosaccharyltransferase 48 kDa subunit beta
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials